Enterprise-Grade NGS BioIT with Speed, Scalability, and Reliability
Accelerate your existing pipelines from FASTQ, BAM, to VCF
BWA/GATK4 industry best practice WGS turnaround with no downsampling
Computing and management cost savings in the cloud
How It Works
Orchestrate a complex string of analysis tools and heterogeneous big data flow to a fast, reliable production workflow based on GATK4 Best Practices.
Design your own pipelines for optimal performance and results by chromosomes, contiguous unambiguous regions, discordant, soft-clipped reads, or coding regions with predictable turnaround.
One-Click Job Submission
Manage and run your jobs from a streamlined and informative web-based user interface with automatic resource scheduling to maximize workflow performance under the hood.
Analyze multiple samples at once to ensure run-to-run configuration consistency with no big data hassle.
Self-Service, On-demand Computing
Containerize your sequencing analysis tools on Docker and quickly run them on the Atgenomix cloud HPC environment.
A simple, yet powerful BioIT automation that takes the complexity out of IT environments and accelerates genomics initiatives.
Complete GRCh38 reference including alternative sequences, plus decoys and HLA
GRCh37 (hg19) reference
Primary distributed file system using commodity hardware
Parallel file system that supports specialized requirements of HPC simulation environments
Azure Data Lake Storage
Online file storage web service for storing and accessing data on Microsoft Azure Data Lake Storage Gen2